OPERA Model Calculation Details: Biodeg. Half-Life

Structural image of Benzenamine, 3-bromo-N-[(2,2-dimethylcyclopropyl)methyl]-
Chemical Identifiers
Preferred name: Benzenamine, 3-bromo-N-[(2,2-dimethylcyclopropyl)methyl]-
DTXSID: DTXSID801195735
DTXCID: DTXCID901626965
CASRN: 2148240-00-8
Molecular weight: 254.171
Model Results
Model name: OPERA_BioDeg
Model source: OPERA2.8
Property name: Biodeg. Half-Life
Property description: Biodegradation half-life for compounds containing only carbon and hydrogen
Experimental value: Experimental value from OPERA2.8
 N/A
Predicted value: Predicted value from the model
3.09 days
Confidence level:  Confidence level is calculated from the accuracy of the predictions of the five nearest neighbors weighted by their distance to the query chemical
0.7
Combined applicability domain:  Combined applicability domain from multiple AD measures
Inside training set (
Global AD  Global applicability domain via the leverage approach
= 1) and fair local representation (0.4 ≤
Local AD index Local applicability domain index is relative to the similarity of the query chemical to its five nearest neighbors from the training set
= 0.555 ≤ 0.6)
Model Performance
Biodeg. Half-Life Model Results Histogram of Biodeg. Half-Life Data
Weighted kNN model statistics
Training (75%) 5-fold CV (75%) Test (25%)
R2 RMSE Q2 RMSE R2 RMSE
0.88 0.26 0.89 0.25 0.75 0.38

Model summary in QSAR Model Reporting Format (QMRF)
Nearest Neighbors from Model Knowledge Base
Neighbor: 1
Measured:  3.02 days
Predicted: Five fold cross validation prediction for the neighbor
 2.82  days

Structural image of 1H-Indene, 2-methyl-
1H-Indene, 2-methyl-

 Neighbor: 2
Measured:  3.02 days
Predicted: Five fold cross validation prediction for the neighbor
 2.95  days

Structural image of 3-Methylindene
3-Methylindene

 Neighbor: 3
Measured:  2.00 days
Predicted: Five fold cross validation prediction for the neighbor
 3.09  days

Structural image of 4-Methylindan
4-Methylindan

 Neighbor: 4
Measured:  2.00 days
Predicted: Five fold cross validation prediction for the neighbor
 2.75  days

Structural image of 5-Methylindan
5-Methylindan

 Neighbor: 5
Measured:  9.12 days
Predicted: Five fold cross validation prediction for the neighbor
 3.98  days

Structural image of 1-Methylnaphthalene
1-Methylnaphthalene

Structural image of Methylnaphthalene
Methylnaphthalene